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Population genetics card game simulator software#

This includes which allele (if either) is fixed the allele and gene copy fixation times the final frequencies of alleles, haplotypes, and genotypes and the ancestral (generation 0) haplotypes and genotypes of the fixed gene copy. A spreadsheet of the outcomes of each iteration.Iterations can also be ended at a fixed number of generations.

The default is to each iteration when allele and gene copy fixation occur for both genes.

The number of iterations of the simulation ( i.e., replicates using the same starting population and other parameters).

Whether self-mating is permitted, self-mating is not permitted, or monogamy is enforced.

The relative mating preferences with regard to the Alpha genotype.

The relative genotype frequencies in an immigrating population, along with the average number of immigrants per generation.

The mutation rates ( A → a, a → A, B → b, b → B).

The default is 50 cM ( i.e., the genes exhibit independent assortment).

The linkage map distance between the two genes.

The highest relative fitness is re-scaled to 1.0.

The relative fitnesses conferred by each of the nine genotypes.

The default is 10 AABB, 20 AABb, 10 AAbb, 20 AaBB, 40 AaBb, 20 Aabb, 10 aaBB, 20 aaBb, and 10 aabb.

The number of individuals with each of the nine genotypes ( e.g., AABB, aaBb).

The user sets the following at the start of the simulation:

Population genetics card game simulator software#

The user sets the number of iterations ( i.e., replicates) that the simulation will perform, and the results of each iteration are written to an output file that can be imported into spreadsheet software for subsequent analysis. Two genes, Alpha and Beta, each have a pair of alleles, so there are nine possible genotypes ( e.g., AABb and Aabb). EvolGenius simulates a diploid, sexually-reproducing population of constant size N, tracking genotype frequencies in discrete generations over time.